Modern sequencing generates vast amounts of data, often leading to complex and time-consuming analysis. Over two decades of working with scientists and researchers, we’ve identified the challenges of bridging the gap between biology and bioinformatics.

Commander is a powerful, GUI-based NGS analysis software designed to eliminate the need for command-line scripting, making high-throughput sequence analysis intuitive and accessible. With just a few clicks, users can generate detailed reports on sequence quality, coverage, mutations, and variants—ideal for small labs and research facilities working with NGS data.

To support COVID-19 and infectious disease research, Commander includes specialized tools for viral genome analysis, enabling faster insights for surveillance, epidemiology, and outbreak response.